Specifications

The table below lists the time it takes various system to generate GTC files for 200K GSA Samples. 

  OS Req per Nodes Scale GTC

IAAP Genotyping Orchestrated Workflow

Ubuntu 16.04  16 GB RAM/8 Cores
N/A ~5 days

IAAP Genotyping Orchestrated Workflow scaled to 3 nodes

Ubuntu 16.04

16 GB RAM/8 Cores
3 nodes ~1.5 days
IAAP Genotyping Orchestrated Workflow scaled to 5 nodes Ubuntu 16.04 16 GB RAM/8 Cores
5 nodes ~1 day