Downloads

Downloads

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HiSeq X Software v3.4.0

This download contains an update to the HiSeq X Software Suite. Download and review the customer release notes for details about this release.

HiSeq X Software v3.3.76.1

This download contains an update to the HiSeq X Software Suite. It includes new versions of HiSeq X Control Software (HCS), Real-Time Analysis (RTA), Recipe Fragments, Sequencing Analysis Viewer (SAV), BaseSpace Broker, and Run Copy Service. Download and review the customer release notes for details about this release.

HiSeq X Software v3.3.39 Release Notes

This document describes the changes and features introduced in HiSeq X software package v3.3.39, which includes HiSeq X Control Software v3.3.39 and updates to RTA, recipes, the BaseSpace Broker, and Sequencing Analysis Viewer software.

HiSeq X Software v3.1.26 Release Notes

This document describes the changes and features introduced in HiSeq X software package v3.1.26, which includes HiSeq X Control Software v3.1.26 and updates to RTA, recipes, the BaseSpace Broker, and Sequencing Analysis Viewer software.

bcl2fastq2 Conversion Software v2.17

This download contains the software, release notes, and software guide for the bcl2fastq2 Conversion Software v2.17, which can be used to both demultiplex data and convert BCL files to FASTQ file formats for downstream analysis. This software requires a Linux operating system.

The bcl2fastq2 Conversion Software v2.17 can be used to convert BCL files from all Illumina sequencing systems running RTA version 1.18.54 and above. For conversion of data generated on Illumina sequencing systems using versions of RTA earlier than RTA 1.18.54, use bcl2fastq v1.8.4.

Software installers are available in both *.rpm and *.tar.gz format. Installation instructions are provided in the Software Guide.

Note: A newer version of bcl2fastq2 Conversion Software (v2.18) is available.

bcl2fastq2 Conversion Software v2.18

This download contains the software, release notes, and software guide for the bcl2fastq2 Conversion Software v2.18, which can be used to both demultiplex data and convert BCL files to FASTQ file formats for downstream analysis. This software requires a Linux operating system.

The bcl2fastq2 Conversion Software v2.18 can be used to convert BCL files from MiniSeq, MiSeq, NextSeq, and HiSeq sequening systems. For conversion of data generated on Illumina sequencing systems using versions of RTA earlier than RTA 1.18.54, use bcl2fastq v1.8.4.

Visit the bcl2fastq2 Conversion Software Downloads page to access the latest version of this software, or find prior versions of bcl2fastq.

The software is available as an RPM (*.rpm) for installation on CentOS/RedHat Linux distributions. A tarball (*.tar.gz) of the source code is also available for compilation on other Linux distributions. Installation instructions are provided in the Software Guide.

bcl2fastq2 Conversion Software v2.19.1

This download contains the software, release notes, and software guide for the bcl2fastq2 Conversion Software v2.19.1, which can be used to both demultiplex data and convert BCL files to FASTQ file formats for downstream analysis. This software requires a Linux operating system.

The bcl2fastq2 Conversion Software v2.19.1 can be used to convert BCL files from MiniSeq, MiSeq, NextSeq, HiSeq, and NovaSeq sequening systems. For conversion of data generated on Illumina sequencing systems using versions of RTA earlier than RTA 1.18.54, use bcl2fastq v1.8.4.

The software is available as an RPM (*.rpm) for installation on CentOS/RedHat Linux distributions. A tarball (*.tar.gz) of the source code is also available for compilation on other Linux distributions. Installation instructions are provided in the Software Guide.

bcl2fastq2 Conversion Software v2.20

This download contains the software, release notes, and software guide for the bcl2fastq2 Conversion Software v2.20.0, which can be used to both demultiplex data and convert BCL files to FASTQ file formats for downstream analysis. This software requires a Linux operating system.

The bcl2fastq2 Conversion Software v2.20.0 can be used to convert BCL files from MiniSeq, MiSeq, NextSeq, HiSeq, and NovaSeq sequening systems. For conversion of data generated on Illumina sequencing systems using versions of RTA earlier than RTA 1.18.54, use bcl2fastq v1.8.4.

The software is available as an RPM (*.rpm) for installation on CentOS/RedHat Linux distributions. A tarball (*.tar.gz) of the source code is also available for compilation on other Linux distributions. Installation instructions are provided in the Software Guide.