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This product is no longer available for purchase.

Consider this alternative product: Nextera DNA Exome

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  • Nextera Rapid Capture Exome Targeted Regions Manifest v1.2 ReadMe

    Changes introduced in the Nextera Rapid Capture Exome v1.2 manifest files.

    ダウンロード

    < 1 MB

    Nov 5, 2015


  • Nextera Rapid Capture Exome v1.2 Product Files

    Release notes, targeted regions manifest files, and the exome probe manifest for Nextera Rapid Capture Exome v1.2. The targeted regions manifest files list the 214,126 targeted exonic regions with start and stop chromosome locations in GRCh37/hg19.


  • Nextera Rapid Capture Exome Product Files

    Nextera Rapid Capture Exome targeted regions manifest files (*.txt and *.bed) and the exome probe manifest. HiSeq Analysis Software requires the TXT format.

    • The targeted regions manifest files list the 212,158 targeted exonic regions with start and stop chromosome locations in GRCh37/hg19.
    • The exome probe manifest file lists the 412,006 enrichment probes with chromosome location in GRCh37/hg19.

  • Nextera Rapid Capture Expanded Exome Product Files

    This download contains the Nextera Rapid Capture Expanded Exome targeted regions manifest files (.txt and .bed), and the exome probe manifest. The targeted regions manifest files list the 201,071 targeted exonic regions with start and stop chromosome locations in GRCh37/hg19. The expanded exome probe manifest file lists the 347,517 enrichment probes with chromosome location in GRCh37/hg19.

    The Nextera Rapid Capture Expanded Exome Targeted Regions Manifest and the Nextera Rapid Capture Expanded Exome Probe Manifest files are in .txt format. This format is required by the HiSeq Analysis Software.

     


  • Nextera Rapid Capture Exome vs. Expanded Exome Overlap File

    Nextera Rapid Capture Exome targeted region intervals that overlap Nextera Rapid Capture Expanded Exome targeted regions. The total overlap is 33 MB between the two products: 189,522 overlapping intervals across 188,621 exome targeted regions (determined by base overlap).

    For example, comparing exome region at Chr 1 position 300–500 with an expanded exome region at Chr 1 position 305–495 results in a 191 bp overlap and two 5 bp unique regions for the exome product.

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    9 MB

    Apr 5, 2013


  • Nextera Rapid Capture Expanded Exome Unique Intervals File

    Nextera Rapid Capture Expanded Exome target region intervals that do not overlap the Nextera Rapid Capture Exome target regions. A total of 29 MB are unique to expanded exome: 50,257 intervals across 47,273 Expanded Exome targeted regions (determined by base overlap only).

    For example, comparing an exome region at Chr 1 position 300–500 with an expanded exome region at Chr 1 position 305–495 results in a 191 bp overlap and two 5 bp unique regions for the exome product.

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    3 MB

    Apr 5, 2013


  • Nextera Rapid Capture Exome Unique Intervals File

    Nextera Rapid Capture Exome target region intervals that do not overlap the Nextera Rapid Capture Exome target region. Exome has 4.1 MB unique intervals: 336,295 intervals across 205,598 exome targeted regions, as determined by base overlap.

    For example, comparing an exome product region at Chr 1 position 300–500 with an expanded exome region at Chr 1 position 305–495 results in a 191 bp overlap and two 5 bp unique regions for exome.

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    17 MB

    Apr 5, 2013


  • HiSeq Analysis Software hg19 Reference Genome

    Human reference genome hg19 from UCSC for the HiSeq Analysis Software.

    ダウンロード

    5.8 GB

    Dec 14, 2012


  • HiSeq Analysis Software v0.9

    Source files, scripts, and documentation needed for installing and running the HiSeq Analysis Software, Version 0.9, on a Linux operating system.


  • Enrichment Analysis Workflow for Nextera Rapid Capture Data

    Demo dataset to validate installation of the enrichment workflow in HiSeq Analysis Software (HAS). It includes a run folder that contains 10% of tiles from one lane of reads from the Coriell Sample, GM10861, enriched using the Nextera Rapid Capture Exome Kit with a plexity of 12.

    Use the command $tar -zxvf NexteraRapidCapture_DemoData to unzip the *tar.gz folder.

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    4.8 GB

    Dec 14, 2012


  • Illumina Experiment Manager v1.11

    The Illumina Experiment Manager v1.11 is a desktop tool that guides you in building library plates and creating the sample sheet used with the MiSeq, NextSeq, HiSeq and NeoPrep systems.